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Structure: Internal structure identifier : 81450
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Automated detection of white matter fiber bundles

Ralph Suarez , Olivier Commowick , Xavier Tomas-Fernandez , Sanjay Prabhu , Simon K. Warfield
IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011, Apr 2011, Chicago, IL, United States. pp.845-848, ⟨10.1109/ISBI.2011.5872536⟩
Conference papers inserm-00607800v1
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Comprehensive Maximum Likelihood Estimation of Diffusion Compartment Models Towards Reliable Mapping of Brain Microstructure

Aymeric Stamm , Olivier Commowick , Simon K Warfield , Simone Vantini
19th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Oct 2016, Athens, Greece. pp.622 - 630, ⟨10.1007/978-3-319-46726-9_72⟩
Conference papers inserm-01349556v1
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Fast Identification of Optimal Fascicle Configurations from Standard Clinical Diffusion MRI Using Akaike Information Criterion

Aymeric Stamm , Olivier Commowick , Patrick Pérez , Christian Barillot
IEEE International Symposium on Biomedical Imaging, Apr 2014, China. pp.238-241
Conference papers inserm-00987802v1
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Tissue microstructure information from T2 relaxometry and diffusion MRI can identify multiple sclerosis (MS) lesions undergoing blood-brain barrier breakdown (BBB)

Sudhanya Chatterjee , Olivier Commowick , Onur Afacan , Simon K. Warfield , Christian Barillot
ISMRM 2019 - 27th Annual Meeting & Exhibition, May 2019, Montreal, Canada. pp.1-4
Conference papers inserm-02153311v1
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Non-central chi estimation of multi-compartment models improves model selection by reducing overfitting

Aymeric Stamm , Benoit Scherrer , Stefano Baraldo , Olivier Commowick , Simon K. Warfield
ISMRM, May 2014, Milan, Italy. pp.2623
Conference papers inserm-00993964v1
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A Bayes Hilbert Space for Compartment Model Computing in Diffusion MRI

Aymeric Stamm , Olivier Commowick , Alessandra Menafoglio , Simon K Warfield
MICCAI 2018 - International Conference on Medical Image Computing and Computer-Assisted Intervention, Sep 2018, Grenade, Spain. pp.72-80, ⟨10.1007/978-3-030-00931-1_9⟩
Conference papers inserm-01937992v1
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Estimating A Reference Standard Segmentation with Spatially Varying Performance Parameters: Local MAP STAPLE

Olivier Commowick , Alireza Akhondi-Asl , Simon K. Warfield
IEEE Transactions on Medical Imaging, 2012, 31 (8), pp.1593-1606. ⟨10.1109/TMI.2012.2197406⟩
Journal articles inserm-00697775v1

Multi-Compartment T2 Relaxometry Model Using Gamma Distribution Representations: A Framework for Quantitative Estimation of Brain Tissue Microstructures

Sudhanya Chatterjee , Olivier Commowick , Simon K. Warfield , Christian Barillot
ISMRM 25TH ANNUAL MEETING & EXHIBITION, Apr 2017, Honolulu, Hawaii, USA, United States
Conference papers inserm-01543073v1
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Registration and Analysis of White Matter Group Differences with a Multi-Fiber Model

Maxime Taquet , Benoit Scherrer , Olivier Commowick , Jurriaan Peters , Mustafa Sahin , et al.
15th International Conference on Medical Image Computing and Computer Assisted Intervention, Oct 2012, Nice, France. pp.313-320
Conference papers inserm-00716110v1
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Objective Evaluation of Multiple Sclerosis Lesion Segmentation using a Data Management and Processing Infrastructure

Olivier Commowick , Audrey Istace , Michael Kain , Baptiste Laurent , Florent Leray , et al.
Scientific Reports, 2018, 8 (1), pp.13650. ⟨10.1038/s41598-018-31911-7⟩
Journal articles inserm-01847873v3
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Block-Matching Distortion Correction of Echo-Planar Images With Opposite Phase Encoding Directions

Renaud Hédouin , Olivier Commowick , Elise Bannier , Benoit Scherrer , Maxime Taquet , et al.
IEEE Transactions on Medical Imaging, 2017, 36 (5), pp.1106 - 1115. ⟨10.1109/TMI.2016.2646920⟩
Journal articles hal-01436561v1
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Interpolation and Averaging of Multi-Compartment Model Images

Renaud Hedouin , Olivier Commowick , Aymeric Stamm , Christian Barillot
18th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Oct 2015, Munich, Germany. pp.354-362, ⟨10.1007/978-3-319-24571-3_43⟩
Conference papers inserm-01185733v1
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A Fast and Log-Euclidean Polyaffine Framework for Locally Linear Registration

Vincent Arsigny , Olivier Commowick , Nicholas Ayache , Xavier Pennec
Journal of Mathematical Imaging and Vision, 2009, 33 (2), pp.222-238. ⟨10.1007/s10851-008-0135-9⟩
Journal articles inria-00616084v1

Automated delineation of white matter fiber tracts with a multiple region-of-interest approach.

Ralph O. Suarez , Olivier Commowick , Sanjay P. Prabhu , Simon K. K. Warfield
NeuroImage, 2012, 59 (4), pp.3690-3700. ⟨10.1016/j.neuroimage.2011.11.043⟩
Journal articles inserm-00657707v1
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A Mathematical Framework for the Registration and Analysis of Multi-Fascicle Models for Population Studies of the Brain Microstructure

Maxime Taquet , Benoit Scherrer , Olivier Commowick , Jurriaan Peters , Mustafa Sahin , et al.
IEEE Transactions on Medical Imaging, 2014, 33 (2), pp.504-517. ⟨10.1109/TMI.2013.2289381⟩
Journal articles inserm-00903679v1
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Symmetric Block-Matching Registration for the Distortion Correction of Echo-Planar Images

Renaud Hedouin , Olivier Commowick , Maxime Taquet , Elise Bannier , Benoit Scherrer , et al.
IEEE International Symposium on Biomedical Imaging (ISBI), Apr 2015, New York, United States. pp.717-720
Conference papers inserm-01118766v1
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Longitudinal multiple sclerosis lesion segmentation: Resource and challenge

Aaron Carass , Snehashis Roy , Amod Jog , Jennifer L. Cuzzocreo , Elizabeth Magrath , et al.
NeuroImage, 2017, 148, pp.77 - 102. ⟨10.1016/j.neuroimage.2016.12.064⟩
Journal articles inserm-01480156v1
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Gaining Insights Into Multiple Sclerosis Lesion Characteristics from Brain Tissue Microstructure Information: A Multi-Compartment T2 Relaxometry Approach

Sudhanya Chatterjee , Olivier Commowick , Simon K. Warfield , Christian Barillot
ISMRM 25TH ANNUAL MEETING & EXHIBITION, Apr 2017, Honolulu, Hawaii, USA, United States
Conference papers inserm-01543061v1
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Identification of Gadolinium contrast enhanced regions in MS lesions using brain tissue microstructure information obtained from diffusion and T2 relaxometry MRI

Sudhanya Chatterjee , Olivier Commowick , Onur Afacan , Simon K Warfield , Christian Barillot
21st International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2018), Sep 2018, Grenade, Spain. pp.63-71, ⟨10.1007/978-3-030-00931-1_8⟩
Conference papers hal-01830532v1
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Incorporating priors on expert performance parameters for segmentation validation and label fusion: a maximum a posteriori STAPLE.

Olivier Commowick , Simon K Warfield
Med Image Comput Comput Assist Interv, Sep 2010, China. pp.25-32
Conference papers inserm-00550016v1
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A three year follow-up study of gadolinium enhanced and non-enhanced regions in multiple sclerosis lesions using a multi-compartment T2 relaxometry model.

Sudhanya Chatterjee , Olivier Commowick , Onur Afacan , Benoît Combès , Simon K. Warfield , et al.
2018
Preprints, Working Papers, ... hal-01837974v1
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Fast and robust detection of the optimal number of fascicles in diffusion images using model averaging theory

Aymeric Stamm , Benoit Scherrer , Olivier Commowick , Christian Barillot , Simon K. Warfield
ISMRM, May 2014, Milan, Italy. pp.2629
Conference papers inserm-00993965v1
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Maximum Likelihood Estimators of Brain White Matter Microstructure

Olivier Commowick , Aymeric Stamm , Simone Vantini , Simon K. Warfield
48th Scientific Meeting of the Italian Statistical Society, Jun 2016, Salerno, Italy
Conference papers inserm-01347200v1
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Validation in medical image processing.

Pierre Jannin , Elizabeth Krupinski , Simon K. K. Warfield
IEEE Transactions on Medical Imaging, 2006, 25 (11), pp.1405-9
Journal articles inserm-00330525v1
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Tracking the Cortico-Spinal Tract as a Multi-Modal Distribution of Streamlines from Local White Matter Microstructure Models

Aymeric Stamm , Olivier Commowick , Xavier Tomas-Fernandez , Jolene Singh , Simon K. Warfield
MICCAI Challenge on DTI Tractography Proceedings, Sep 2014, Boston, United States. pp.21-32
Conference papers inserm-01066812v2